miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|190858571|gb|FG088515.1|FG088515 AATTGACCTAGTATGTTGCTAAATTATCACGTTACTTTTACAAATTGCATTGATAATAGTAAAATTTAAGACAATAATGG
CTCATGCCGTACATTTGGATGATGAGGAAATAGCTCTATTTCAAAAACGCGGTACATCTGTTGCACATTGTCCGGCGTCA
AATACGATGCTATCTTCTGGTTTTTGCGATGTGTTGCGAATTATAAAACAAGGCGTGAAAGTTGGATTAGGCACAGATGT
TTCTGGCGGTAATTCGATGTCAATACAGGATGCGATTTTACGAGCACTGGATGTATCTCATCATTTGGAGTTCGTGAAAA
AGCAAGATATTAAAGGTTGTGGCCGTTCATCAATTCAAGATCAACATTATCGACCACTTAATTATAAAGAAGCCATATAT
TTGGCAACACTTGGTGGTGCTGAAGCTCTGGCTTTGAGTAATATCACGGGAAATTTTGTGGCGGGTAAAGATTTTGATGC
ATTGGTAATCGATACTACCAACTATCCATTGCACAATTTCTATATTGTTGATGATAATAAGCCACAGGACTTGCAGTTGT
TGGAATTGATACAGAAATTCATTTATGTTGGGGATGATCGCAATATTTTACGTGTATATGTAGCTGGCAAGCAAATTAAA
TAGATACAAAAATGTAGATTATAACAAACAAATTCACTTAACTTTTTATTAAAATACTTTAAATAATATACCTTTTTGAA
ATGTGATGACACAGAGTTGTACAACTCCAAATTTTGTTTATTCAAATAAAACATGTATGAACATGTAAAAAAAAAAAAAA
AAAAAA




Most similar to sp|Q9R111|GUAD_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9R111|GUAD_MOUSE Guanine deaminase OS=Mus musculus GN=Gda PE=1
           SV=1
          Length = 454

 Score =  131 bits (330), Expect = 5e-30
 Identities = 81/194 (41%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
 Frame = +2

Query: 68  KTIMAHAVHLDDEEIALFQKRGTSVAHCPASNTMLSSGFCDVLRIIKQGVKVGLGTDVSG 247
           KT+MAH  +L +EE+ +F +RG S+AHCP SN  LSSG  +VL ++K  VK+GLGTDV+G
Sbjct: 274 KTVMAHGCYLSEEELNIFSERGASIAHCPNSNLSLSSGLLNVLEVLKHKVKIGLGTDVAG 333

Query: 248 GNSMSIQDAILRALDVSHHLEFVKKQDIKGCGRSSIQDQHYRPLNYKEAIYXXXXXXXXX 427
           G S S+ DAI RA+ VS+ L   K  +              + L  KE            
Sbjct: 334 GYSYSMLDAIRRAVMVSNVLLINKVNE--------------KNLTLKEVFRLATLGGSQA 379

Query: 428 XXXSNITGNFVAGKDFDALVID--TTNYPLHNFY--IVDDNKPQDLQLLELIQKFIYVGD 595
               +  GNF  GK+FDAL+I+   ++ P+  FY   V D          +IQKF+Y+GD
Sbjct: 380 LGLDSEIGNFEVGKEFDALLINPRASDSPIDLFYGDFVGDISE------AVIQKFLYLGD 433

Query: 596 DRNILRVYVAGKQI 637
           DRNI  VYV GKQ+
Sbjct: 434 DRNIEEVYVGGKQV 447